PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110065.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 295aa    MW: 34076.2 Da    PI: 6.7927
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110065.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix64.91.8e-2017103286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     Wt++e+ +Liea+++++ +l+rg+lk p+Wee++  +        +++ ++s+ qC++k+e+l++r++   ++ +      ss +pyfd ++
  XP_010110065.1  17 WTHEETVHLIEAYQQKWYSLNRGQLKSPQWEEIAVTVaarcgydFSHPSSKSALQCRHKMEKLRQRFRSHSHRLGP-----SSPWPYFDLMD 103
                     *************************************9999*****************************999997.....568*****998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.7E-1816105No hitNo description
PROSITE profilePS500905.9931680IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MSSSPEPTGK KPQPIPWTHE ETVHLIEAYQ QKWYSLNRGQ LKSPQWEEIA VTVAARCGYD  60
FSHPSSKSAL QCRHKMEKLR QRFRSHSHRL GPSSPWPYFD LMDRLLRGPF PISARPMDYD  120
DEDQPCHAAA YEPDLDHRDV HHDNDDDDDD ESSYTKSRSI NYILRQPTIV NRFAVGEEKL  180
GIGGRCADDG VHRVFWEEPA AKRARNDGCD VEREKGRESE SVLRLAKEIR AFSERIVGME  240
SMKMEMMKET ERCRIEMESK RIEMIIRSQH KIVDSIARAF GSSSPNRLSV TKAES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010110065.10.0hypothetical protein L484_003045
TrEMBLW9S4640.0W9S464_9R
STRINGGLYMA16G14040.26e-75(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF100872835
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.11e-52Trihelix family protein